The genetic landscape of a cell.

نویسندگان

  • Michael Costanzo
  • Anastasia Baryshnikova
  • Jeremy Bellay
  • Yungil Kim
  • Eric D Spear
  • Carolyn S Sevier
  • Huiming Ding
  • Judice L Y Koh
  • Kiana Toufighi
  • Sara Mostafavi
  • Jeany Prinz
  • Robert P St Onge
  • Benjamin VanderSluis
  • Taras Makhnevych
  • Franco J Vizeacoumar
  • Solmaz Alizadeh
  • Sondra Bahr
  • Renee L Brost
  • Yiqun Chen
  • Murat Cokol
  • Raamesh Deshpande
  • Zhijian Li
  • Zhen-Yuan Lin
  • Wendy Liang
  • Michaela Marback
  • Jadine Paw
  • Bryan-Joseph San Luis
  • Ermira Shuteriqi
  • Amy Hin Yan Tong
  • Nydia van Dyk
  • Iain M Wallace
  • Joseph A Whitney
  • Matthew T Weirauch
  • Guoqing Zhong
  • Hongwei Zhu
  • Walid A Houry
  • Michael Brudno
  • Sasan Ragibizadeh
  • Balázs Papp
  • Csaba Pál
  • Frederick P Roth
  • Guri Giaever
  • Corey Nislow
  • Olga G Troyanskaya
  • Howard Bussey
  • Gary D Bader
  • Anne-Claude Gingras
  • Quaid D Morris
  • Philip M Kim
  • Chris A Kaiser
  • Chad L Myers
  • Brenda J Andrews
  • Charles Boone
چکیده

A genome-scale genetic interaction map was constructed by examining 5.4 million gene-gene pairs for synthetic genetic interactions, generating quantitative genetic interaction profiles for approximately 75% of all genes in the budding yeast, Saccharomyces cerevisiae. A network based on genetic interaction profiles reveals a functional map of the cell in which genes of similar biological processes cluster together in coherent subsets, and highly correlated profiles delineate specific pathways to define gene function. The global network identifies functional cross-connections between all bioprocesses, mapping a cellular wiring diagram of pleiotropy. Genetic interaction degree correlated with a number of different gene attributes, which may be informative about genetic network hubs in other organisms. We also demonstrate that extensive and unbiased mapping of the genetic landscape provides a key for interpretation of chemical-genetic interactions and drug target identification.

برای دانلود رایگان متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Genetic and Epigenetic landscape of Germline Stem Cells

Elucidating the critical epigenetics events involved in differentiation and reprogramming of cells to primordial germ cells (PGCs) is among the interesting issues in stem cell research. Here, I will talk about critical transcription factors and global hypomethylation in development of germ cells. Evidence strongly suggests that the earliest PGCs emerging in the E7.25 mouse embryo epiblast have...

متن کامل

LAGA: A Software for Landscape Allocation using Genetic Algorithm

In this paper, Landscape Allocation using Genetic Algorithm (LAGA), a spatial multi-objective land use optimization software is introduced. The software helps in searching for optimal land use when multiple objectives such as suitability, area, cohesion and edge density indices are simultaneously involved. LAGA is a flexible and easy to use genetic algorithm-based software for optimizing the sp...

متن کامل

مقایسه ساختار اراضی مرتعی و میزان تخریب پیوستگی سیمای سرزمین در زیرحوزه‌های آبخیز ایریل، استان اردبیل

The aim of this research was to compare the rangelands structure and landscape degradation in Iril sub-watersheds, Ardabil province. Land use map and the Landscape Fragmentation Tool were used to determine 4 classes of patch, edge, perforated and core through 5, 10, 15 and 20m cell sizes. The landscape metrics of LPI, ED, cohesion, mesh, split, and AI were calculated using Fragstats software. R...

متن کامل

Onm-19: Role of Epigenetic in Transgenerarional Disease

Epigenetic alterations have been related to many biological processes and disease; however, the global epigenetic status of most cell types has not been investigated yet in detail. The ability of environmental factors to promote a phenotype or disease state not only in the individual exposed but also in subsequent progeny for successive generations is termed transgenerational inheritance. The m...

متن کامل

ارزیابی پیوستگی سیمای سرزمین و کریدورهای مهاجرتی آهوی گواتردار در مناطق مرکزی ایران

Long-term survival of Goitered gazelles in central Iran has been threatened because of isolation of existing populations and genetic threats. Effective management of these small and isolated populations needs to evaluate landscape connectivity among core habitat patches. In the present study, resistance surfaces were mapped as a function of twelve uncorrelated variables using species distributi...

متن کامل

استفاده از بعد فراکتالی برای بررسی اثر مقیاس بر حساسیت سنجه‌های سیمای سرزمین

The sensitivity of landscape metrics to the scale effect is one of the most challenging issues in landscape ecology and quantification of land use spatial patterns. In this study, fractal dimension was employed to assess the effect of scale on the sensitivity of landscape metric in the north of Iran (around Sari) as the case study. Land use/ cover maps were derived from Landsat-8 (OLI sensor) i...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

عنوان ژورنال:
  • Science

دوره 327 5964  شماره 

صفحات  -

تاریخ انتشار 2010